clonealign: statistical integration of independent single-cell RNA and DNA sequencing data from human cancers.
Engineered in-vitro cell line mixtures and robust evaluation of computational methods for clonal decomposition and longitudinal dynamics in cancer.
E-scape: interactive visualization of single-cell phylogenetics and cancer evolution.
Multifocal clonal evolution characterized using circulating tumour DNA in a case of metastatic breast cancer.
Multifocal endometriotic lesions associated with cancer are clonal and carry a high mutation burden.
Dynamics of genomic clones in breast cancer patient xenografts at single-cell resolution.