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Epiclomal

Epiclomal package, software for clustering of sparse DNA methylation data

This folder contains the following:

  • epiclomal is the software for clustering in Python 3.0
  • scripts contains R scripts to generate synthetic data, run non-probabilistic methods and generate plots. Some of the requirements for scripts are: MCMCpack, densityCut (https://bitbucket.org/jerry00/densitycut_dev) and its requirements, NbClust.

More examples and scripts are coming soon.