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CellScape is a visualization tool for integrating single cell phylogeny with genomic content to clearly display evolutionary progression and tumour heterogeneity.

Installation

To install CellScape, type the following commands in R:

# try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("cellscape")

Examples

Run the examples by:

example("cellscape")

Documentation

To view the documentation for CellScape, type the following command in R:

?cellscape

or:

browseVignettes("cellscape") 

References

CellScape was developed at the Shah Lab for Computational Cancer Biology at the BC Cancer Research Centre.